STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITC_074290ABC transporter, integral membrane type 1. (1537 aa)    
Predicted Functional Partners:
PITC_080230
Ubiquitin carboxyl-terminal hydrolase.
    
  0.609
PITC_018930
ATPase, AAA-type, core; Belongs to the AAA ATPase family.
    
 0.590
PITC_066430
ATPase, AAA-type, core.
    
 0.590
PITC_092870
ABC-2 type transporter.
    
 0.580
PITC_029680
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.551
PITC_055690
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.541
PITC_028850
ATPase, AAA-type, core.
    
  0.538
PITC_018450
Uncharacterized protein.
    
  0.538
PITC_068380
ATPase, AAA-type, core.
    
  0.538
PITC_059840
Uncharacterized protein.
    
 0.530
Your Current Organism:
Penicillium italicum
NCBI taxonomy Id: 40296
Other names: CBS 339.48, P. italicum
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