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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE39598.1Anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)    
Predicted Functional Partners:
AJE41270.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.926
AJE44444.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.856
AJE40292.1
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.842
AJE39597.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.794
AJE39594.1
prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.577
AJE39599.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.577
AJE40509.1
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.435
AJE43123.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.435
AJE39406.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.
    
   0.420
AJE41548.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.
    
   0.420
Your Current Organism:
Streptomyces nodosus
NCBI taxonomy Id: 40318
Other names: ATCC 14899, ATCC 23942, BCRC 13768, CBS 926.68, CCRC 13768, CCRC:13768, DSM 40109, IFO 12895, ISP 5109, JCM 4297, JCM 4656, KCTC 9035, LMG 19340, LMG:19340, NBRC 12895, NCIMB 12816, NRRL B-2371, NRRL-ISP 5109, RIA 831, S. nodosus
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