Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJE40514.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)    
Predicted Functional Partners:
ftsY
Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
   
 0.747
ffh
Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 
 0.591
AJE39112.1
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.479
AJE39662.1
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.479
AJE39862.1
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.479
AJE41027.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.479
AJE41206.1
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.479
AJE42316.1
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.479
AJE42495.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.479
AJE42678.1
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.479
Your Current Organism:
Streptomyces nodosus
NCBI taxonomy Id: 40318
Other names: ATCC 14899, ATCC 23942, BCRC 13768, CBS 926.68, CCRC 13768, CCRC:13768, DSM 40109, IFO 12895, ISP 5109, JCM 4297, JCM 4656, KCTC 9035, LMG 19340, LMG:19340, NBRC 12895, NCIMB 12816, NRRL B-2371, NRRL-ISP 5109, RIA 831, S. nodosus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.