STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE42079.1Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)    
Predicted Functional Partners:
AJE42842.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.879
AJE42078.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.859
AJE39988.1
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.799
AJE40944.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.786
AJE41190.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.777
AJE38956.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.755
AJE42559.1
Large Ala/Glu-rich protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.752
AJE43104.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.741
AJE40844.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.738
AJE42233.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.716
Your Current Organism:
Streptomyces nodosus
NCBI taxonomy Id: 40318
Other names: ATCC 14899, ATCC 23942, BCRC 13768, CBS 926.68, CCRC 13768, CCRC:13768, DSM 40109, IFO 12895, ISP 5109, JCM 4297, JCM 4656, KCTC 9035, LMG 19340, LMG:19340, NBRC 12895, NCIMB 12816, NRRL B-2371, NRRL-ISP 5109, RIA 831, S. nodosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.