Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJE41295.1 | AJE44437.1 | SNOD_15550 | SNOD_33975 | Component of aromatic polyketide synthase related to WhiE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.401 |
AJE42085.1 | AJE43699.1 | SNOD_20140 | SNOD_29565 | Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydroxybenzoate-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.591 |
AJE42085.1 | AJE44437.1 | SNOD_20140 | SNOD_33975 | Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.577 |
AJE42085.1 | AJE44549.1 | SNOD_20140 | SNOD_33970 | Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Isochorismatase. | 0.851 |
AJE43238.1 | AJE44437.1 | SNOD_26855 | SNOD_33975 | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.537 |
AJE43699.1 | AJE42085.1 | SNOD_29565 | SNOD_20140 | Hydroxybenzoate-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.591 |
AJE43699.1 | AJE44437.1 | SNOD_29565 | SNOD_33975 | Hydroxybenzoate-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.765 |
AJE43699.1 | AJE44549.1 | SNOD_29565 | SNOD_33970 | Hydroxybenzoate-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Isochorismatase. | 0.999 |
AJE44437.1 | AJE41295.1 | SNOD_33975 | SNOD_15550 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Component of aromatic polyketide synthase related to WhiE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.401 |
AJE44437.1 | AJE42085.1 | SNOD_33975 | SNOD_20140 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.577 |
AJE44437.1 | AJE43238.1 | SNOD_33975 | SNOD_26855 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.537 |
AJE44437.1 | AJE43699.1 | SNOD_33975 | SNOD_29565 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydroxybenzoate-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.765 |
AJE44437.1 | AJE44549.1 | SNOD_33975 | SNOD_33970 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Isochorismatase. | 0.697 |
AJE44437.1 | argB-2 | SNOD_33975 | SNOD_33965 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.410 |
AJE44549.1 | AJE42085.1 | SNOD_33970 | SNOD_20140 | Isochorismatase. | Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.851 |
AJE44549.1 | AJE43699.1 | SNOD_33970 | SNOD_29565 | Isochorismatase. | Hydroxybenzoate-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
AJE44549.1 | AJE44437.1 | SNOD_33970 | SNOD_33975 | Isochorismatase. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.697 |
AJE44549.1 | argB-2 | SNOD_33970 | SNOD_33965 | Isochorismatase. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.451 |
argB-2 | AJE44437.1 | SNOD_33965 | SNOD_33975 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
argB-2 | AJE44549.1 | SNOD_33965 | SNOD_33970 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Isochorismatase. | 0.451 |