STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ltuc_0212Coiled-coil protein. (534 aa)    
Predicted Functional Partners:
Ltuc_1523
Lipoprotein VacJ-like protein.
    
 
 0.844
Ltuc_0858
Coiled-coil protein.
  
     0.714
Ltuc_0577
IcmL-like protein.
  
 
 0.711
Ltuc_0932
Hypothetical protein.
  
     0.697
Ltuc_1715
CAAX amino terminal protease self- immunity.
  
     0.692
iraA
Small-molecule methyltransferase IraA.
  
     0.686
Ltuc_2857
Ankyrin repeats (3 copies).
  
     0.665
enhA_1
Enhanced entry protein EnhA.
  
     0.657
Ltuc_0625
Hypothetical protein.
  
     0.650
Ltuc_1238
Hypothetical protein.
  
     0.646
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.