Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
ahpC_1Alkyl hydroperoxide reductase. (201 aa)    
Predicted Functional Partners:
grlA
Glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.
  
 
 0.862
sodB
Superoxide dismutase, iron; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.826
trxB
Thioredoxin reductase.
  
 
 0.811
Ltuc_0115
Bacterioferritin comigratory protein.
 
 
 0.700
Ltuc_2107
Cytochrome C biogenesis protein.
  
 0.691
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.681
Ltuc_0241
Thiol-disulfide oxidoreductase.
  
 0.650
ccmG
Cytochrome C biogenesis protein.
  
 0.650
fur
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.642
sodC
Superoxide dismutase, Cu, Zn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 
 0.636
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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