STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ltuc_0262Hypothetical protein; Belongs to the UPF0102 family. (118 aa)    
Predicted Functional Partners:
Ltuc_0261
Lipoprotein.
     
 0.809
yifB
Bifunctional enzyme and transcriptional regulator.
 
  
 0.739
comF
Competence protein ComF.
 
    0.696
yraO
DnaA initiator-associating factor for replication initiation.
  
  
 0.625
yraL
Methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.615
Ltuc_0852
Regulatory protein (GGDEF domain).
  
    0.605
smf
Protein smf.
 
    0.583
Ltuc_0264
Putative lipoprotein.
       0.565
Ltuc_0265
Hemolysin, lipoprotein.
       0.565
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.