STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ltuc_0325Hypothetical protein; Belongs to the UPF0149 family. (194 aa)    
Predicted Functional Partners:
ubiH
2-octaprenyl-6-methoxyphenol hydroxylase.
 
   
 0.810
pepP
Proline aminopeptidase P II.
 
   
 0.805
visC
Oxidoreductase with FAD/NAD(P)-binding domain protein.
     
 0.752
Ltuc_0171
SCP-2 sterol transfer family protein.
  
     0.688
zapA
Cell division protein ZapA.
  
  
 0.638
truD
Hydrogenase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.
  
     0.627
pilZ_1
Type IV pilus assembly PilZ.
  
     0.620
Ltuc_2280
Membrane fusogenic activity.
  
    0.604
mreD
Rod shape-determining protein MreD.
  
     0.594
fliO
Flagellar protein fliO.
  
     0.591
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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