Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Ltuc_0477Polyketide synthase. (3753 aa)    
Predicted Functional Partners:
Ltuc_2167
acyl-CoA synthetase.
 
 0.999
Ltuc_2624
acyl-CoA synthetase.
 
 0.999
Ltuc_2640
Hypothetical protein.
 
0.999
aas
2- acylglycerophosphoethanolamineacyltransferase/acyl-(acyl- carrier-protein) synthetase.
  
 0.997
Ltuc_2641
Hypothetical protein.
 
0.993
fabD_1
Malonyl CoA-ACP transacylase.
 0.991
Ltuc_2162
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase.
 
 0.990
fabD_2
Malonyl CoA-ACP transacylase.
 0.982
Ltuc_0679
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
 0.977
pta
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
 0.975
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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