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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ltuc_0740Anti-anti-sigma factor. (94 aa)    
Predicted Functional Partners:
ttg2D
Toluene tolerance protein Ttg2D.
  
 
 0.976
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
  
 0.952
yrbF
Toluene transporter subunit: ATP-binding component of ABC superfamily protein.
  
 0.947
yrbE
Toluene transporter subunit: membrane component of ABC superfamily protein.
  
 0.939
Ltuc_0660
ABC transporter ATP binding protein.
  
 0.766
Ltuc_0661
Mammalian cell entry related domain protein.
  
 0.747
Ltuc_0659
ABC transporter permease.
  
 0.733
kdsD
Arabinose 5-phosphate isomerase.
     
 0.639
lptB
Lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily protein.
       0.582
Ltuc_0732
OstA family protein.
       0.582
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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