STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ltuc_0793Hemolysin D. (267 aa)    
Predicted Functional Partners:
aaeB
P-hydroxybenzoic acid efflux pump subunit AaeB.
 
  
 0.929
Ltuc_1400
Multidrug resistance protein, MFS superfamily.
  
   0.749
Ltuc_2378
Outer membrane efflux protein.
 
 0.720
Ltuc_2400
Outer membrane efflux protein.
 
 0.701
lmxE
Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
  0.682
tolC
Outer membrane protein TolC.
 
 0.681
Ltuc_1279
Multidrug resistance ABC transporter ATP binding protein.
  
 0.656
Ltuc_1398
Outer membrane efflux lipoprotein.
 
 0.650
Ltuc_2904
Outer membrane efflux protein.
 
 0.636
Ltuc_0183
ABC transporter permease.
  
  
 0.635
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.