Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ltuc_0807Hypothetical protein. (791 aa)    
Predicted Functional Partners:
ftsX
Cell division ABC transporter permease FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.738
amiB
N-acetylmuramoyl-L-alanine amidase.
   
 
 0.652
Ltuc_0806
Hypothetical protein.
       0.613
Ltuc_1538
Protease.
   
   0.571
Ltuc_0223
Sensory box histidine kinase/response regulator.
    
  0.500
Ltuc_2044
Sensory histidine-kinase / response regulator.
    
  0.500
Ltuc_0367
Chemotaxis histidine kinase.
    
  0.499
Ltuc_0348
Two-component sensor histidine kinase.
     
  0.498
Ltuc_0808
Hypothetical protein.
       0.486
Ltuc_1101
Response regulator.
     
  0.414
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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