STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ltuc_0944Sel1 repeat protein. (378 aa)    
Predicted Functional Partners:
putA
Bifunctional PutA protein (proline dehydrogenase/ delta-1-pyrroline-5-carboxylate dehydrogenase); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.683
Ltuc_0223
Sensory box histidine kinase/response regulator.
   
 0.582
Ltuc_2044
Sensory histidine-kinase / response regulator.
   
 0.582
Ltuc_1963
Sensory box sensor histidine kinase/response regulator.
    
 0.551
Ltuc_0943
Peptide maturation protein PmbA.
       0.545
Ltuc_0941
Hypothetical protein.
   
  0.483
Ltuc_1948
Ras family GTPase.
  
 
   0.480
Ltuc_0610
Sel-1 protein.
  
     0.416
Ltuc_0942
Hypothetical protein.
       0.409
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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