Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ltuc_1227 | erpA | Ltuc_1227 | Ltuc_0972 | Glycine cleavage T protein. | Iron-sulfur cluster assembly accessory protein family protein; Required for insertion of 4Fe-4S clusters for at least IspG. | 0.530 |
| Ltuc_1337 | Ltuc_2661 | Ltuc_1337 | Ltuc_2661 | Putative iron-sulpher cluster proteins NifU. | Cysteine desulfurase. | 0.668 |
| Ltuc_1337 | djlA | Ltuc_1337 | Ltuc_1806 | Putative iron-sulpher cluster proteins NifU. | Molecular chaperone DnaJ; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | 0.975 |
| Ltuc_1337 | erpA | Ltuc_1337 | Ltuc_0972 | Putative iron-sulpher cluster proteins NifU. | Iron-sulfur cluster assembly accessory protein family protein; Required for insertion of 4Fe-4S clusters for at least IspG. | 0.650 |
| Ltuc_1337 | iscS | Ltuc_1337 | Ltuc_1338 | Putative iron-sulpher cluster proteins NifU. | Cysteine desulfurase. | 0.998 |
| Ltuc_1337 | sufD | Ltuc_1337 | Ltuc_2659 | Putative iron-sulpher cluster proteins NifU. | Component of SufBCD complex. | 0.668 |
| Ltuc_1577 | erpA | Ltuc_1577 | Ltuc_0972 | Hypothetical protein. | Iron-sulfur cluster assembly accessory protein family protein; Required for insertion of 4Fe-4S clusters for at least IspG. | 0.584 |
| Ltuc_2657 | Ltuc_2661 | Ltuc_2657 | Ltuc_2661 | NifU family FeS assembly SUF system protein. | Cysteine desulfurase. | 0.943 |
| Ltuc_2657 | djlA | Ltuc_2657 | Ltuc_1806 | NifU family FeS assembly SUF system protein. | Molecular chaperone DnaJ; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | 0.978 |
| Ltuc_2657 | erpA | Ltuc_2657 | Ltuc_0972 | NifU family FeS assembly SUF system protein. | Iron-sulfur cluster assembly accessory protein family protein; Required for insertion of 4Fe-4S clusters for at least IspG. | 0.739 |
| Ltuc_2657 | iscS | Ltuc_2657 | Ltuc_1338 | NifU family FeS assembly SUF system protein. | Cysteine desulfurase. | 0.998 |
| Ltuc_2657 | sufD | Ltuc_2657 | Ltuc_2659 | NifU family FeS assembly SUF system protein. | Component of SufBCD complex. | 0.952 |
| Ltuc_2661 | Ltuc_1337 | Ltuc_2661 | Ltuc_1337 | Cysteine desulfurase. | Putative iron-sulpher cluster proteins NifU. | 0.668 |
| Ltuc_2661 | Ltuc_2657 | Ltuc_2661 | Ltuc_2657 | Cysteine desulfurase. | NifU family FeS assembly SUF system protein. | 0.943 |
| Ltuc_2661 | erpA | Ltuc_2661 | Ltuc_0972 | Cysteine desulfurase. | Iron-sulfur cluster assembly accessory protein family protein; Required for insertion of 4Fe-4S clusters for at least IspG. | 0.534 |
| Ltuc_2661 | sufD | Ltuc_2661 | Ltuc_2659 | Cysteine desulfurase. | Component of SufBCD complex. | 0.999 |
| djlA | Ltuc_1337 | Ltuc_1806 | Ltuc_1337 | Molecular chaperone DnaJ; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | Putative iron-sulpher cluster proteins NifU. | 0.975 |
| djlA | Ltuc_2657 | Ltuc_1806 | Ltuc_2657 | Molecular chaperone DnaJ; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | NifU family FeS assembly SUF system protein. | 0.978 |
| djlA | erpA | Ltuc_1806 | Ltuc_0972 | Molecular chaperone DnaJ; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | Iron-sulfur cluster assembly accessory protein family protein; Required for insertion of 4Fe-4S clusters for at least IspG. | 0.813 |
| djlA | grlA | Ltuc_1806 | Ltuc_0219 | Molecular chaperone DnaJ; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | Glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.648 |
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