STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilOTfp pilus assembly protein PilO. (199 aa)    
Predicted Functional Partners:
pilN
Tfp pilus assembly protein PilN.
 
 
 0.998
pilP
Tfp pilus assembly protein PilP.
 
 
 0.996
pilM
Tfp pilus assembly protein, ATPase PilM.
 
 
 0.991
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
 
 0.989
Ltuc_1711
LysM domain-containing protein.
  
 
   0.924
pilE_2
Type-IV pilin.
 
   
 0.824
pilZ_2
Type 4 fimbrial biogenesis protein PilZ.
  
   
 0.797
Ltuc_2144
Pre-pilin leader sequence (pilV).
 
   
 0.784
fimV
FimV protein.
  
  
 0.779
pilF
Twitching motility protein PilF.
  
   
 0.726
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.