STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ltuc_1975Outer membrane efflux protein. (444 aa)    
Predicted Functional Partners:
Ltuc_1976
Hemolysin D.
 
  0.908
lmxE
Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.848
lmxF
Multidrug efflux pump.
 
  0.795
acrA
RND efflux membrane fusion protein, acriflavin resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.771
Ltuc_2398
Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.714
Ltuc_2399
Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.706
emrA
Multidrug efflux system.
 
  0.693
Ltuc_0586
Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.651
Ltuc_1977
Hypothetical protein.
       0.641
Ltuc_1978
Hypothetical protein.
       0.641
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.