STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ltuc_2000Chitinase. (778 aa)    
Predicted Functional Partners:
chiA
Chitinase A precursor.
 
 0.971
Ltuc_2876
Glycosyl hydrolase family 18; Belongs to the glycosyl hydrolase 18 family.
 
 0.970
Ltuc_0360
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.946
Ltuc_0991
Choline kinase.
  
  
  0.852
Ltuc_0422
Putative secreted esterase.
  
 
 0.846
Ltuc_1128
Chitinase.
 
  
0.836
smc_1
Chromosome partition protein Smc.
  
 
 
 0.814
Ltuc_2792
Hypothetical protein.
 
  
  0.799
Ltuc_0799
Hypothetical protein.
 
   
 0.791
Ltuc_2640
Hypothetical protein.
  
  
 0.765
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.