STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ltuc_2012Hypothetical protein; C-terminal part of DNA polymerase, bacteriophage-type. (212 aa)    
Predicted Functional Partners:
ssb
Single-strand binding protein (SSB) (Helix-destabilizing protein).
   
   0.702
Ltuc_1082
uracil-DNA glycosylase.
     
 0.659
Ltuc_0830
Glycoprotease.
  
    0.624
Ltuc_2241
Peptidase, M23 family.
   
   0.570
Ltuc_0550
2-nitropropane dioxygenase.
    
  0.434
Ltuc_2013
Hypothetical protein.
       0.430
mltD
Membrane-bound lytic murein transglycosylase D.
   
   0.420
Ltuc_1881
Methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family.
 
   
 0.412
Ltuc_2148
DNA internalization-related competence protein ComEC/Rec2.
      
 0.400
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.