Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
abcT_3ABC transporter ATP-binding protein. (588 aa)    
Predicted Functional Partners:
uup_2
ABC transporter ATP-binding protein.
 
 
   0.872
Ltuc_2640
Hypothetical protein.
 
 0.743
Ltuc_0477
Polyketide synthase.
   
 0.604
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.573
Ltuc_1279
Multidrug resistance ABC transporter ATP binding protein.
   
  0.540
aas
2- acylglycerophosphoethanolamineacyltransferase/acyl-(acyl- carrier-protein) synthetase.
   
 0.475
Ltuc_2641
Hypothetical protein.
  
 0.459
Ltuc_2013
Hypothetical protein.
   
  0.449
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
  
   0.449
Ltuc_2167
acyl-CoA synthetase.
  
 0.444
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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