wipB protein (Legionella tucsonensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Legionella tucsonensis

NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
exoA	wipB	Ltuc_2132	Ltuc_2134	Exodeoxyribonuclease.	Substrate of the Dot/Icm secretion system.	0.692
exoA	wrbA	Ltuc_2132	Ltuc_2133	Exodeoxyribonuclease.	Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.	0.761
exoA	xthA	Ltuc_2132	Ltuc_2131	Exodeoxyribonuclease.	Exodeoxyribonuclease III.	0.984
hslU	hslV	Ltuc_2135	Ltuc_2136	ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.	Peptidase component of the HslUV protease (Heat shock protein); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.	0.999
hslU	wipB	Ltuc_2135	Ltuc_2134	ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.	Substrate of the Dot/Icm secretion system.	0.512
hslU	wrbA	Ltuc_2135	Ltuc_2133	ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.	Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.	0.459
hslV	hslU	Ltuc_2136	Ltuc_2135	Peptidase component of the HslUV protease (Heat shock protein); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.	ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.	0.999
hslV	wipB	Ltuc_2136	Ltuc_2134	Peptidase component of the HslUV protease (Heat shock protein); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.	Substrate of the Dot/Icm secretion system.	0.583
hslV	wrbA	Ltuc_2136	Ltuc_2133	Peptidase component of the HslUV protease (Heat shock protein); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.	Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.	0.472
wipB	exoA	Ltuc_2134	Ltuc_2132	Substrate of the Dot/Icm secretion system.	Exodeoxyribonuclease.	0.692
wipB	hslU	Ltuc_2134	Ltuc_2135	Substrate of the Dot/Icm secretion system.	ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.	0.512
wipB	hslV	Ltuc_2134	Ltuc_2136	Substrate of the Dot/Icm secretion system.	Peptidase component of the HslUV protease (Heat shock protein); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.	0.583
wipB	wrbA	Ltuc_2134	Ltuc_2133	Substrate of the Dot/Icm secretion system.	Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.	0.766
wipB	xthA	Ltuc_2134	Ltuc_2131	Substrate of the Dot/Icm secretion system.	Exodeoxyribonuclease III.	0.692
wrbA	exoA	Ltuc_2133	Ltuc_2132	Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.	Exodeoxyribonuclease.	0.761
wrbA	hslU	Ltuc_2133	Ltuc_2135	Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.	ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.	0.459
wrbA	hslV	Ltuc_2133	Ltuc_2136	Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.	Peptidase component of the HslUV protease (Heat shock protein); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.	0.472
wrbA	wipB	Ltuc_2133	Ltuc_2134	Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.	Substrate of the Dot/Icm secretion system.	0.766
wrbA	xthA	Ltuc_2133	Ltuc_2131	Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.	Exodeoxyribonuclease III.	0.761
xthA	exoA	Ltuc_2131	Ltuc_2132	Exodeoxyribonuclease III.	Exodeoxyribonuclease.	0.984