Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Ltuc_2140 | Ltuc_2141 | Dolichyl-phosphate-mannose-protein mannosyltransferase. | Substrate of the Dot/Icm secretion system. | 0.421 |
Ltuc_2141 | Ltuc_2140 | Substrate of the Dot/Icm secretion system. | Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.421 |
Ltuc_2141 | Ltuc_2142 | Substrate of the Dot/Icm secretion system. | Polysaccharide deacetylase domain-containing protein. | 0.478 |
Ltuc_2141 | Ltuc_2144 | Substrate of the Dot/Icm secretion system. | Pre-pilin leader sequence (pilV). | 0.409 |
Ltuc_2141 | Ltuc_2145 | Substrate of the Dot/Icm secretion system. | Tfp pilus assembly protein PilW. | 0.406 |
Ltuc_2142 | Ltuc_2141 | Polysaccharide deacetylase domain-containing protein. | Substrate of the Dot/Icm secretion system. | 0.478 |
Ltuc_2142 | Ltuc_2144 | Polysaccharide deacetylase domain-containing protein. | Pre-pilin leader sequence (pilV). | 0.600 |
Ltuc_2142 | Ltuc_2145 | Polysaccharide deacetylase domain-containing protein. | Tfp pilus assembly protein PilW. | 0.600 |
Ltuc_2144 | Ltuc_2141 | Pre-pilin leader sequence (pilV). | Substrate of the Dot/Icm secretion system. | 0.409 |
Ltuc_2144 | Ltuc_2142 | Pre-pilin leader sequence (pilV). | Polysaccharide deacetylase domain-containing protein. | 0.600 |
Ltuc_2144 | Ltuc_2145 | Pre-pilin leader sequence (pilV). | Tfp pilus assembly protein PilW. | 0.987 |
Ltuc_2145 | Ltuc_2141 | Tfp pilus assembly protein PilW. | Substrate of the Dot/Icm secretion system. | 0.406 |
Ltuc_2145 | Ltuc_2142 | Tfp pilus assembly protein PilW. | Polysaccharide deacetylase domain-containing protein. | 0.600 |
Ltuc_2145 | Ltuc_2144 | Tfp pilus assembly protein PilW. | Pre-pilin leader sequence (pilV). | 0.987 |