STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ltuc_2144Pre-pilin leader sequence (pilV). (179 aa)    
Predicted Functional Partners:
Ltuc_2145
Tfp pilus assembly protein PilW.
 
  
 0.987
Ltuc_2146
Tfp pilus assembly protein PilX.
 
  
 0.986
pilE_2
Type-IV pilin.
 
  
 0.985
Ltuc_2143
Type IV pre-pilin.
 
  
 0.971
Ltuc_2764
Type IV fimbrial biogenesis PilY1-like protein.
 
  
 0.945
pilN
Tfp pilus assembly protein PilN.
 
   
 0.787
pilO
Tfp pilus assembly protein PilO.
 
   
 0.784
pilP
Tfp pilus assembly protein PilP.
  
  
 0.782
Ltuc_0866
Transmembrane protein.
  
   
 0.745
Ltuc_1711
LysM domain-containing protein.
  
     0.698
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.