STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilE_2Type-IV pilin. (141 aa)    
Predicted Functional Partners:
Ltuc_2144
Pre-pilin leader sequence (pilV).
 
  
 0.985
Ltuc_2145
Tfp pilus assembly protein PilW.
 
  
 0.950
Ltuc_2146
Tfp pilus assembly protein PilX.
 
  
 0.945
Ltuc_2143
Type IV pre-pilin.
 
  
 0.936
Ltuc_2764
Type IV fimbrial biogenesis PilY1-like protein.
 
  
 0.910
pilN
Tfp pilus assembly protein PilN.
 
  
 0.835
pilO
Tfp pilus assembly protein PilO.
 
   
 0.824
pilP
Tfp pilus assembly protein PilP.
  
  
 0.815
pilM
Tfp pilus assembly protein, ATPase PilM.
 
   
 0.815
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
   
 0.798
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.