Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ltuc_0223 | Ltuc_0365 | Ltuc_0223 | Ltuc_0365 | Sensory box histidine kinase/response regulator. | Guanylate/adenylate cyclase. | 0.998 |
Ltuc_0223 | Ltuc_0367 | Ltuc_0223 | Ltuc_0367 | Sensory box histidine kinase/response regulator. | Chemotaxis histidine kinase. | 0.998 |
Ltuc_0223 | Ltuc_0477 | Ltuc_0223 | Ltuc_0477 | Sensory box histidine kinase/response regulator. | Polyketide synthase. | 0.850 |
Ltuc_0223 | Ltuc_1086 | Ltuc_0223 | Ltuc_1086 | Sensory box histidine kinase/response regulator. | Hypothetical protein. | 0.416 |
Ltuc_0223 | Ltuc_2044 | Ltuc_0223 | Ltuc_2044 | Sensory box histidine kinase/response regulator. | Sensory histidine-kinase / response regulator. | 0.997 |
Ltuc_0223 | Ltuc_2151 | Ltuc_0223 | Ltuc_2151 | Sensory box histidine kinase/response regulator. | Hypothetical protein. | 0.856 |
Ltuc_0223 | Ltuc_2389 | Ltuc_0223 | Ltuc_2389 | Sensory box histidine kinase/response regulator. | Adenylate/guanylate cyclase transmembrane protein. | 0.887 |
Ltuc_0223 | Ltuc_2640 | Ltuc_0223 | Ltuc_2640 | Sensory box histidine kinase/response regulator. | Hypothetical protein. | 0.890 |
Ltuc_0223 | letS_1 | Ltuc_0223 | Ltuc_0837 | Sensory box histidine kinase/response regulator. | Legionella transmission sensor LetS. | 0.997 |
Ltuc_0223 | letS_2 | Ltuc_0223 | Ltuc_2796 | Sensory box histidine kinase/response regulator. | Legionella transmission sensor LetS. | 0.998 |
Ltuc_0365 | Ltuc_0223 | Ltuc_0365 | Ltuc_0223 | Guanylate/adenylate cyclase. | Sensory box histidine kinase/response regulator. | 0.998 |
Ltuc_0365 | Ltuc_0367 | Ltuc_0365 | Ltuc_0367 | Guanylate/adenylate cyclase. | Chemotaxis histidine kinase. | 0.997 |
Ltuc_0365 | Ltuc_0477 | Ltuc_0365 | Ltuc_0477 | Guanylate/adenylate cyclase. | Polyketide synthase. | 0.426 |
Ltuc_0365 | Ltuc_1086 | Ltuc_0365 | Ltuc_1086 | Guanylate/adenylate cyclase. | Hypothetical protein. | 0.446 |
Ltuc_0365 | Ltuc_2044 | Ltuc_0365 | Ltuc_2044 | Guanylate/adenylate cyclase. | Sensory histidine-kinase / response regulator. | 0.997 |
Ltuc_0365 | Ltuc_2151 | Ltuc_0365 | Ltuc_2151 | Guanylate/adenylate cyclase. | Hypothetical protein. | 0.804 |
Ltuc_0365 | Ltuc_2389 | Ltuc_0365 | Ltuc_2389 | Guanylate/adenylate cyclase. | Adenylate/guanylate cyclase transmembrane protein. | 0.906 |
Ltuc_0365 | Ltuc_2640 | Ltuc_0365 | Ltuc_2640 | Guanylate/adenylate cyclase. | Hypothetical protein. | 0.522 |
Ltuc_0365 | letS_1 | Ltuc_0365 | Ltuc_0837 | Guanylate/adenylate cyclase. | Legionella transmission sensor LetS. | 0.997 |
Ltuc_0365 | letS_2 | Ltuc_0365 | Ltuc_2796 | Guanylate/adenylate cyclase. | Legionella transmission sensor LetS. | 0.998 |
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