STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ltuc_21622,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. (238 aa)    
Predicted Functional Partners:
Ltuc_2640
Hypothetical protein.
 
 0.998
Ltuc_2167
acyl-CoA synthetase.
  
 0.997
Ltuc_0477
Polyketide synthase.
 
 0.991
Ltuc_2641
Hypothetical protein.
 
 0.989
Ltuc_2624
acyl-CoA synthetase.
 
 0.981
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
  0.904
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.903
Ltuc_2174
Acyl carrier protein.
  
 0.903
Ltuc_2422
Acyl carrier protein.
  
 0.903
Ltuc_2912
Hypothetical protein.
  
 0.903
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.