Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lysSaccharopine dehydrogenase. (357 aa)    
Predicted Functional Partners:
Ltuc_2187
Hypothetical protein.
       0.538
Ltuc_0809
Alkane monooxygenase.
  
     0.528
Ltuc_0725
Dimethylaniline monooxygenase.
  
     0.507
Ltuc_1148
Sterol desaturase-related protein.
  
     0.477
Ltuc_2641
Hypothetical protein.
  
   
 0.469
ychF
GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
     
  0.453
tuf
Elongation factor Tu (EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
       0.440
Ltuc_2262
Fructose-bisphosphate aldolase.
     
  0.409
Ltuc_2640
Hypothetical protein.
  
   
 0.402
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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