STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ltuc_2575PAP2 superfamily protein. (243 aa)    
Predicted Functional Partners:
Ltuc_1160
Transmembrane protein.
  
 
   0.631
Ltuc_2167
acyl-CoA synthetase.
   
 0.609
Ltuc_2162
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase.
  
 
  0.584
aas
2- acylglycerophosphoethanolamineacyltransferase/acyl-(acyl- carrier-protein) synthetase.
   
 0.574
Ltuc_0212
Coiled-coil protein.
  
     0.558
Ltuc_2251
Ankyrin repeat protein.
  
 
  0.550
dgkA
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
 
  
 0.546
Ltuc_1086
Hypothetical protein.
    
 0.534
Ltuc_2183
Sphingomyelin phosphodiesterase.
 
  
  0.520
pgpA
Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
    
 0.516
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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