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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icmWIntracellular multiplication protein IcmW. (151 aa)    
Predicted Functional Partners:
Ltuc_2338
Protein IcmS.
    
 
 0.904
lvgA
Virulence protein LvgA.
    
 
 0.882
Ltuc_2334
Protein IcmO (DotL).
    
 
 0.879
Ltuc_1659
Conjugative coupling factor TraD.
    
 
 0.843
icmX
Intracellular multiplication protein IcmX.
     
 0.814
Ltuc_1009
Phospholipase, patatin family.
    
   0.682
icmV
Intracellular multiplication protein IcmV.
     
 0.638
dotA
Defect in organelle trafficking protein DotA.
       0.601
ankD
Substrate of the Dot/Icm secretion system.
       0.445
copA
Copper transporting P-type ATPase.
       0.431
Your Current Organism:
Legionella tucsonensis
NCBI taxonomy Id: 40335
Other names: ATCC 49180, CCUG 31119, CIP 105113, DSM 19246, L. tucsonensis, NCTC 12439
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