STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_20276LITAF domain-containing protein. (163 aa)    
Predicted Functional Partners:
BDEG_28134
Guanylate kinase.
    
 0.760
BDEG_20745
IFT81_CH domain-containing protein.
    
 0.716
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.716
BDEG_26174
Uncharacterized protein.
    
 0.695
BDEG_20550
Uncharacterized protein.
    
 0.679
BDEG_24352
Uncharacterized protein.
   
 0.678
BDEG_22728
Uncharacterized protein.
   
 0.676
BDEG_24840
Uncharacterized protein.
   
 0.676
BDEG_26534
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.676
BDEG_25418
Uncharacterized protein.
    
 0.675
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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