STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_20370Ribosomal protein L31e. (120 aa)    
Predicted Functional Partners:
BDEG_20042
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 0.999
BDEG_20653
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.999
BDEG_20688
Ribosomal protein L18e/L15; Belongs to the universal ribosomal protein uL15 family.
   
 0.999
BDEG_20912
40S ribosomal protein S20.
   
 
 0.999
BDEG_20525
60S ribosomal protein L3-A; Belongs to the universal ribosomal protein uL3 family.
   
 0.999
BDEG_20752
Ubiquitin.
   
 0.999
BDEG_21154
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.999
BDEG_21502
Ribosomal L18p/L5e family protein.
   
 0.999
BDEG_21501
Ribosomal protein L14.
   
 0.999
BDEG_21835
Ribosomal protein L19e.
   
 0.999
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.