STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_20387Threonine-tRNA ligase. (706 aa)    
Predicted Functional Partners:
BDEG_28017
Tyrosine--tRNA ligase.
  
 
 0.731
BDEG_22476
Ribosomal protein L15.
   
 
 0.644
BDEG_26545
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.641
BDEG_27778
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.634
BDEG_20693
Tr-type G domain-containing protein.
  
 0.629
BDEG_26532
Uncharacterized protein.
   
 
 0.627
BDEG_20108
30S ribosomal protein S12.
   
 
 0.616
BDEG_23901
Ribosomal protein S15.
  
 
 0.609
BDEG_24804
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.607
BDEG_20799
Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.606
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.