STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_20395Uncharacterized protein. (104 aa)    
Predicted Functional Partners:
BDEG_25244
CPSF_A domain-containing protein.
    
 
 0.860
BDEG_22373
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.749
BDEG_22994
Uncharacterized protein.
    
 0.655
BDEG_26561
Uncharacterized protein.
    
 0.655
BDEG_24490
Protein kinase domain-containing protein.
     
 0.555
BDEG_24709
Protein kinase domain-containing protein.
     
 0.555
BDEG_20510
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.481
BDEG_22445
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.481
BDEG_23562
Ubiquitin-conjugating enzyme E2 4; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.481
BDEG_24129
E3 ubiquitin-protein ligase RBX1.
    
 
 0.481
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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