STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_21054Uncharacterized protein. (900 aa)    
Predicted Functional Partners:
BDEG_23365
Skp1_POZ domain-containing protein.
    
 0.862
BDEG_25214
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.862
BDEG_25988
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.862
BDEG_26543
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.855
BDEG_26544
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.855
BDEG_24129
E3 ubiquitin-protein ligase RBX1.
    
 0.827
BDEG_27765
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.812
BDEG_25974
Ribosomal protein L2.
    
 0.787
BDEG_22181
UV excision repair protein Rad23.
    
 0.771
BDEG_23428
60S ribosomal protein L2-B, variant.
    
 0.756
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.