STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_20825Pyruvate kinase; Belongs to the pyruvate kinase family. (494 aa)    
Predicted Functional Partners:
BDEG_22469
Enolase.
  
 0.921
BDEG_27988
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.906
BDEG_25688
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.888
BDEG_24293
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
  
 0.875
BDEG_24324
30S ribosomal protein S13.
  
 0.860
BDEG_24545
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 0.856
BDEG_23728
Pyruvate carboxylase.
   
 0.844
BDEG_24751
Uncharacterized protein.
  
 0.840
BDEG_24750
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.840
BDEG_21502
Ribosomal L18p/L5e family protein.
  
 
 0.839
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.