STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_20864Uncharacterized protein. (667 aa)    
Predicted Functional Partners:
BDEG_25738
MSP domain-containing protein.
   
 
 0.692
BDEG_24189
DUF4821 domain-containing protein.
    
 0.680
BDEG_24952
RRM domain-containing protein.
    
 0.680
BDEG_25979
Homeobox domain-containing protein.
    
 0.680
BDEG_26841
Homeobox domain-containing protein.
    
 0.680
BDEG_27288
Pheromone receptor transcription factor.
    
 0.657
BDEG_24285
BZIP domain-containing protein.
    
 0.646
BDEG_25804
Histone-lysine N-methyltransferase, H3 lysine-4 specific.
    
 0.627
BDEG_20700
Histone H2B; Belongs to the histone H2B family.
    
  0.626
BDEG_26652
Ribosomal protein L11 methyltransferase (PrmA); Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.624
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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