STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_21922Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (523 aa)    
Predicted Functional Partners:
BDEG_24674
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.819
BDEG_21183
ANK_REP_REGION domain-containing protein.
    
  0.589
BDEG_21788
Zn(2)-C6 fungal-type domain-containing protein.
    
  0.589
BDEG_21785
Zn(2)-C6 fungal-type domain-containing protein.
    
  0.589
BDEG_26309
Uncharacterized protein.
    
  0.589
BDEG_26103
Tryptophan synthase.
     
 0.572
BDEG_22760
Adenine phosphoribosyltransferase.
   
  
 0.558
BDEG_22631
Uncharacterized protein.
  
  
 0.532
BDEG_26116
Galactokinase.
    
  0.497
BDEG_20127
Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.
     
 0.461
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.