STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_22635Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (280 aa)    
Predicted Functional Partners:
BDEG_26307
Protoheme IX farnesyltransferase.
   
 
 0.848
BDEG_25802
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
  
 
0.772
BDEG_20110
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.669
BDEG_27944
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.669
BDEG_21554
Cytochrome c domain-containing protein.
   
 
 0.628
BDEG_22625
Uncharacterized protein.
   
  
 0.625
BDEG_26910
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.497
BDEG_27329
Exonuclease domain-containing protein.
      
 0.459
BDEG_26672
Epimerase domain-containing protein.
   
 
 0.429
BDEG_21815
PUM-HD domain-containing protein.
    
   0.400
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.