STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_23018GAS domain-containing protein. (488 aa)    
Predicted Functional Partners:
BDEG_22002
Thymidylate synthase.
     
 0.842
BDEG_22753
NYD-SP28 domain-containing protein.
  
 
 
 0.800
BDEG_24888
Inner dynein arm light chain, axonemal.
  
 
 
 0.775
BDEG_26472
Pantoate-beta-alanine ligase.
     
 0.738
BDEG_23158
Dephospho-CoA kinase.
    
 0.734
BDEG_24899
DFP domain-containing protein.
     
 0.725
BDEG_27720
CTP_transf_like domain-containing protein.
    
 0.716
BDEG_20573
BHLH domain-containing protein.
     
 0.669
BDEG_26300
Pantothenate kinase.
     
 0.656
BDEG_27001
Uncharacterized protein.
  
   
 0.655
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.