STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_23907t-SNARE coiled-coil homology domain-containing protein. (340 aa)    
Predicted Functional Partners:
BDEG_21858
Uncharacterized protein.
   
 0.998
BDEG_24557
Dsl1_C domain-containing protein.
    
 0.994
BDEG_22455
Uncharacterized protein.
    
 0.974
BDEG_24124
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.963
BDEG_21235
Uncharacterized protein.
   
 0.957
BDEG_23809
Longin domain-containing protein; Belongs to the synaptobrevin family.
   
 0.949
BDEG_24448
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.936
BDEG_23339
CSN8_PSD8_EIF3K domain-containing protein.
    
 0.923
BDEG_23461
Uncharacterized protein.
    
 0.907
BDEG_23997
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.860
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.