STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_23288Argininosuccinate synthase. (417 aa)    
Predicted Functional Partners:
BDEG_20989
Argininosuccinate lyase.
 
 
 0.996
BDEG_25023
Carbamoyl-phosphate synthase, large subunit.
 
 
 0.994
BDEG_27861
Ornithine aminotransferase.
  
 0.953
BDEG_28129
Dethiobiotin synthase.
  
 0.941
BDEG_25642
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.907
BDEG_21719
M20_dimer domain-containing protein.
  
 0.900
BDEG_24221
M20_dimer domain-containing protein.
  
 0.898
BDEG_26391
Aspartokinase.
  
 
 0.897
BDEG_21624
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 
 0.889
BDEG_25622
Amidophosphoribosyltransferase.
  
 
 0.879
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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