STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_238784HBT domain-containing protein. (315 aa)    
Predicted Functional Partners:
BDEG_26788
Uncharacterized protein.
     
 0.740
BDEG_22034
AB hydrolase-1 domain-containing protein.
     
 0.679
BDEG_27074
Hydrolase_4 domain-containing protein.
     
 0.679
BDEG_28228
Glycogen synthase kinase-3 alpha.
    
 0.602
BDEG_28638
Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
  0.600
BDEG_20019
23S rRNA methyltransferase.
    
  0.600
BDEG_20306
Protein kinase domain-containing protein.
    
  0.600
BDEG_20312
Uncharacterized protein.
    
  0.600
BDEG_21610
Protein kinase domain-containing protein.
    
  0.600
BDEG_23661
F-box domain-containing protein.
    
  0.600
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.