STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_23724Uncharacterized protein. (403 aa)    
Predicted Functional Partners:
BDEG_22935
Uncharacterized protein.
    
 0.969
BDEG_27050
Uncharacterized protein.
    
 0.969
BDEG_24352
Uncharacterized protein.
    
 0.916
BDEG_20882
Uncharacterized protein.
    
 0.885
BDEG_20752
Ubiquitin.
    
 0.849
BDEG_25758
Uncharacterized protein.
    
 0.847
BDEG_23128
Ribosomal protein L21e.
   
 
 0.837
BDEG_25670
Ubiquitin.
    
 0.820
BDEG_28157
Uncharacterized protein.
    
 0.820
BDEG_22857
DNA repair protein (Mre11); Belongs to the MRE11/RAD32 family.
    
 0.797
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.