STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_24264Uncharacterized protein. (527 aa)    
Predicted Functional Partners:
BDEG_21533
Uncharacterized protein.
   
 
 0.997
BDEG_24717
Uncharacterized protein.
   
 
 0.997
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.996
BDEG_22913
WD_REPEATS_REGION domain-containing protein.
   
 
 0.996
BDEG_23517
NUC153 domain-containing protein.
   
 
 0.995
BDEG_20331
WD_REPEATS_REGION domain-containing protein.
   
   0.994
BDEG_23488
WD_REPEATS_REGION domain-containing protein.
   
 
 0.994
BDEG_26470
Pre-rRNA-processing protein PNO1.
   
 
 0.994
BDEG_24861
Uncharacterized protein.
   
 
 0.993
BDEG_25229
Uncharacterized protein.
   
 
 0.993
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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