STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_25059Velvet domain-containing protein. (376 aa)    
Predicted Functional Partners:
BDEG_28134
Guanylate kinase.
    
 0.721
BDEG_22663
Uncharacterized protein; Belongs to the NDK family.
    
 0.719
BDEG_28315
Ribosomal protein S11.
    
  0.684
BDEG_27086
Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
   
  0.682
BDEG_23901
Ribosomal protein S15.
   
  0.681
BDEG_23982
Ribosomal protein S16.
   
  0.681
BDEG_20799
Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.
    
  0.680
BDEG_24718
Ribosomal protein S6.
    
  0.680
BDEG_20770
Ribosomal protein S10p/S20e.
    
  0.679
BDEG_23014
Uncharacterized protein.
    
  0.679
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.