STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_24533DUF3835 domain-containing protein. (397 aa)    
Predicted Functional Partners:
BDEG_25451
RNA polymerase Rpb5 domain-containing protein.
    
 
 0.858
BDEG_24722
Prefoldin, alpha subunit.
    
 
 0.831
BDEG_25847
Uncharacterized protein.
    
 
 0.820
BDEG_25433
Uncharacterized protein.
    
 
 0.796
BDEG_27368
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.749
BDEG_23467
TPR_REGION domain-containing protein.
    
 
 0.737
BDEG_24623
Uncharacterized protein.
    
 
 0.737
BDEG_27605
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.733
BDEG_21006
WD_REPEATS_REGION domain-containing protein.
    
 
 0.670
BDEG_28379
Uncharacterized protein.
    
 
 0.659
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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