STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_25413Uncharacterized protein. (158 aa)    
Predicted Functional Partners:
BDEG_28453
Uncharacterized protein.
   
 0.942
BDEG_21291
Uncharacterized protein.
    
 0.940
BDEG_27331
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.937
BDEG_21475
Uncharacterized protein.
    
 0.934
BDEG_20534
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.933
BDEG_23445
Trafficking protein particle complex subunit BET3.
    
 0.933
BDEG_26644
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.898
BDEG_20657
Uncharacterized protein.
    
 0.889
BDEG_23616
Uncharacterized protein.
    
 0.859
BDEG_22887
Uncharacterized protein.
    
 0.815
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.