Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDEG_20472 | BDEG_21674 | A0A177W9I1 | A0A177WC48 | Thioredoxin reductase. | Stress-response A/B barrel domain-containing protein. | 0.819 |
BDEG_20472 | BDEG_21990 | A0A177W9I1 | A0A177WF73 | Thioredoxin reductase. | DAO domain-containing protein. | 0.775 |
BDEG_20472 | BDEG_22819 | A0A177W9I1 | A0A177WFM6 | Thioredoxin reductase. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.776 |
BDEG_20472 | BDEG_25527 | A0A177W9I1 | A0A177WPG9 | Thioredoxin reductase. | AMP_N domain-containing protein. | 0.655 |
BDEG_21674 | BDEG_20472 | A0A177WC48 | A0A177W9I1 | Stress-response A/B barrel domain-containing protein. | Thioredoxin reductase. | 0.819 |
BDEG_21674 | BDEG_21990 | A0A177WC48 | A0A177WF73 | Stress-response A/B barrel domain-containing protein. | DAO domain-containing protein. | 0.954 |
BDEG_21674 | BDEG_22819 | A0A177WC48 | A0A177WFM6 | Stress-response A/B barrel domain-containing protein. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.951 |
BDEG_21674 | BDEG_24988 | A0A177WC48 | A0A177WNX4 | Stress-response A/B barrel domain-containing protein. | Indole-3-glycerol phosphate synthase. | 0.630 |
BDEG_21674 | BDEG_25527 | A0A177WC48 | A0A177WPG9 | Stress-response A/B barrel domain-containing protein. | AMP_N domain-containing protein. | 0.716 |
BDEG_21674 | BDEG_26628 | A0A177WC48 | A0A177WTW3 | Stress-response A/B barrel domain-containing protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | 0.458 |
BDEG_21990 | BDEG_20472 | A0A177WF73 | A0A177W9I1 | DAO domain-containing protein. | Thioredoxin reductase. | 0.775 |
BDEG_21990 | BDEG_21674 | A0A177WF73 | A0A177WC48 | DAO domain-containing protein. | Stress-response A/B barrel domain-containing protein. | 0.954 |
BDEG_21990 | BDEG_25527 | A0A177WF73 | A0A177WPG9 | DAO domain-containing protein. | AMP_N domain-containing protein. | 0.609 |
BDEG_22819 | BDEG_20472 | A0A177WFM6 | A0A177W9I1 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | Thioredoxin reductase. | 0.776 |
BDEG_22819 | BDEG_21674 | A0A177WFM6 | A0A177WC48 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | Stress-response A/B barrel domain-containing protein. | 0.951 |
BDEG_22819 | BDEG_25527 | A0A177WFM6 | A0A177WPG9 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | AMP_N domain-containing protein. | 0.609 |
BDEG_23999 | BDEG_24228 | A0A177WKB3 | A0A177WL03 | WD_REPEATS_REGION domain-containing protein. | Mitochondrial intermediate peptidase. | 0.404 |
BDEG_23999 | BDEG_25158 | A0A177WKB3 | A0A177WPI7 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein; Belongs to the peptidase S9B family. | 0.733 |
BDEG_23999 | BDEG_25527 | A0A177WKB3 | A0A177WPG9 | WD_REPEATS_REGION domain-containing protein. | AMP_N domain-containing protein. | 0.650 |
BDEG_24228 | BDEG_23999 | A0A177WL03 | A0A177WKB3 | Mitochondrial intermediate peptidase. | WD_REPEATS_REGION domain-containing protein. | 0.404 |
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