STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_25158Uncharacterized protein; Belongs to the peptidase S9B family. (909 aa)    
Predicted Functional Partners:
BDEG_21165
Uncharacterized protein; Belongs to the peptidase M24B family.
   
 
 0.816
BDEG_24748
P/Homo B domain-containing protein.
     
 0.776
BDEG_28206
Guanine nucleotide-binding protein subunit beta.
    
 0.738
BDEG_23999
WD_REPEATS_REGION domain-containing protein.
     
 0.733
BDEG_26714
Peptidase_S9 domain-containing protein.
  
   
 0.680
BDEG_26002
Uncharacterized protein.
    
 
 0.670
BDEG_21212
Signal peptidase complex catalytic subunit SEC11.
  
 
 0.661
BDEG_25527
AMP_N domain-containing protein.
   
 
 0.651
BDEG_20351
Uncharacterized protein.
    
 0.648
BDEG_23772
Uncharacterized protein.
    
 0.648
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.