STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_25976Arginase; Belongs to the arginase family. (290 aa)    
Predicted Functional Partners:
BDEG_27861
Ornithine aminotransferase.
 
 0.993
BDEG_28202
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 
 0.923
BDEG_25642
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.901
BDEG_28129
Dethiobiotin synthase.
  
 0.898
BDEG_24674
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 
 0.896
BDEG_22327
CN hydrolase domain-containing protein.
  
 0.882
BDEG_25023
Carbamoyl-phosphate synthase, large subunit.
  
 0.878
BDEG_26485
SWIRM domain-containing protein.
  
 
 0.874
BDEG_23288
Argininosuccinate synthase.
   
 
 0.869
BDEG_20989
Argininosuccinate lyase.
     
 0.868
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.